The replicated paper¶
Soroye P., Newbold T., Kerr J. (2020). Climate change contributes to widespread declines among bumble bees across continents. Science 367(6478):685–688. Soroye et al. (2020) · Wikidata Q89582023
Data sources¶
Soroye et al. data repository (continental Bombus occurrences, R scripts, CRU TS climate). Figshare. Soroye et al. (2020)
GBIF Occurrence Download (Iberian Bombus, 36 560 records, ES + PT, georeferenced, no geospatial issues, accessed 2026-04-25). License CC-BY-NC 4.0. GBIF.org User (2026)
CRU TS 3.24.01 monthly climate (Harris et al. 2014). Harris et al. (2013)
This work¶
Source code archive (Zenodo concept DOI, resolves to latest version): Fouilloux (2026)
Source code v0.2.1: Fouilloux (2026)
Docker container image v0.2.1: Fouilloux (2026)
Repository: github
.com /annefou /weatherxbiodiversity
The 9-nanopub chain¶
| # | Step | URI |
|---|---|---|
| 1 | Quote-with-comment | RAQ9l3vNjaSUeYZ8A0wgrzDPEbQQXBbd8jMszJ8pBzoiw |
| 2 | AIDA sentence | RAdv1pQt3itwTZtddbsLz7LLprlCHj72bEF-oXQVeYtdU |
| 3 | FORRT Claim | RArj4912Wm6DO0Y-sR8KeaJsZUKrVcJHWArmINg-kaOhs |
| 4 | Phase 2 Replication Study (Robustness) | RADLcvxDglyzEnEfAo9e6RfnXQ_YK3v_gJcnWLVBkIbP4 |
| 5 | Phase 2 Replication Outcome — Validated, High | RABeytsVYYMfRz_Jb3O__naWSg8Z63WTnQsofidkdrVvk |
| 6 | Phase 3 Replication Study (Replicability) | RA51YMjEluCKKQWWIuB9_SBU88dgCaonVuqtS4CspPiUE |
| 7 | Phase 3 Replication Outcome — Validated, High | RAIylrhtnfTH_vtp1nTDVAiGsv2u_Ea4Uvh35DrGySuWs |
| 8 | CiTO — Phase 2 confirms Soroye 2020 | RAdvbQt3vXT0HpyNYdwwMBs8fVnmyv5KWFT0eXfVTDXg0 |
| 9 | CiTO — Phase 3 confirms Soroye 2020 | RApCQTLMP8h0jDYF9ggWU6lMTW7a_KG5_Jygbsx0aTpIo |
Frameworks and standards¶
FORRT — Framework for Open and Reproducible Research Training. forrt.org
Nanopublications. nanopub.net · published via knowledgepixels.com
Science Live platform. platform
.sciencelive4all .org CiTO — Citation Typing Ontology. https://
sparontologies .github .io /cito /current /cito .html AIDA sentences. Atomic, Independent, Declarative, Absolute claim format.
Tooling¶
Python 3.12 ·
xarray,pandas,statsmodels,scipy· environment.ymlpygbiffor GBIF download API accesspyprojfor cylindrical-equal-area projectionMyST + Jupyter Book for this site
- Soroye, P., Newbold, T., & Kerr, J. (2020). Climate change contributes to widespread declines among bumble bees across continents. Science, 367(6478), 685–688. 10.1126/science.aax8591
- GBIF.org User. (2026). Occurrence Download. The Global Biodiversity Information Facility. 10.15468/DL.3FRMSQ
- Harris, I., Jones, P. D., Osborn, T. J., & Lister, D. H. (2013). Updated high‐resolution grids of monthly climatic observations – the <scp>CRU TS3</scp> .10 Dataset. International Journal of Climatology, 34(3), 623–642. 10.1002/joc.3711
- Fouilloux, A. (2026). WeatherXBiodiversity: Soroye et al. (2020) Replication for Iberian Bombus. Zenodo. 10.5281/ZENODO.19756173
- Fouilloux, A. (2026). WeatherXBiodiversity: Soroye et al. (2020) Replication for Iberian Bombus. Zenodo. 10.5281/ZENODO.19762723
- Fouilloux, A. (2026). weatherxbiodiversity v0.2.1 — Docker container image. Zenodo. 10.5281/ZENODO.19762828